VISUAL GENOMICS - Pattern analysis
Visual analysis of genomic data
DM-CANCER
: Data Mining for Carcinogen Patterns
→ Cancer Chromosomes
→ Anomalies Detection
→ Triangle breaks vs all breaks
→ Patterns analysis
Pattern:
Valid triangles
0: 1 2; 1: 0 2; 2: 0 1;
0: 0;
0: 1; 1: 0; - I
0: 1; 1: 0 1;
0: 2; 1: 2; 2: 0 1; - V
0: 2; 1: 2; 2: 0 1 2;
0: 1; 1: 0 2; 2: 1 2;
0: 2; 1: 3; 2: 0 3; 3: 1 2; - U
0: 3; 1: 3; 2: 3; 3: 0 1 2; - Y
Select cancer
Select patient
Mode:
Base-pairs
Total breaks
Patterns:
Triangles
No patterns
